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Team
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Project Title/Page
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Presentation Date
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Allen Jared, Rhishikesh Akole, Harshit Krishna
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Discovering pathways by orienting edges in protein interaction networks
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Wednesday 11/30/2011
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Aysegul Ozkan, Klood Alazwary, Mimonah Al Qathrady
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A Self Organizing Algorithm for Modeling Protein Loops
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Eyup Serdar Ayaz
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Signaling Pathway Reconstruction
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Wednesday 11/30/2011
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Anshu Ranjan, Neha Bhatia and Sathvik Laxminarayan
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Sampling of Large Phylogenetic Trees
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Friday 12/02/2011
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Anuj Shroff, Ameya Bondre
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A suffix-array based algorithm for clustering expression data.
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Wednesday 11/23/2011
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Ravi Teja, Kriti Khurana
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Implementation of DynaDock: Protien-Peptide docking including receptor flexibility
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Friday 12/02/2011
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Haitham Gabr
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Enhanced topology-aware coloring for detecting signaling pathways in protein interaction networks
Data
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Monday 11/28/2011
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Sagar Gaikwad, Mohit agrawal
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Implementation of nested web logo
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Monday 11/21/2011
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Darren Goldfarb, Drew Goldfarb
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Protein Tertiary Structure Prediction Using Multiple Templates
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Wednesday 12/07/2011
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Abhisek Gautam Saikia, Ankit Srivastava, Kuppuraj Gunasekaran
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Phylogenetic Motif detection
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Monday 12/05/2012
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Leila Kalantari
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A method for genomic segmentation according to histone modification
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Wednesday 11/23/2011
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Md Mahmudul Hasan
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An Efficient Algorithm for Finding Size-k Sub-graphs in a Directed Labeled Graph
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Wednesday 11/23/2011
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Chris Jenneisch, Hemnath Ramakumar
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Probabilistic topic modelling for genomic interpretation
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Monday 11/21/2011
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Alexander Kushnir
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Combinatorial Complexity Of DNA Regions
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Junjie Li
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Parallel Adaptation of Pairwise Sequences Alignment Algorithm for Large Sequences on GPUs
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Monday 11/28/2011
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Sravani Boggaram, Prashanth Mahalingam Ganesan, Akshatha R Shenoy
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Network Motif Detection
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Monday 12/05/2011
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Yadunandan Parthasarathy, Sameer Nandkeolyar, Milan Jape
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Tandem Repeats Identification in DNA sequences (STRING)
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Wednesday 12/07/2011
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Shantanu Sardal, Ajita Ananth
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A dynamic programming algorithm for identification of triplex-forming sequences
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Friday 12/02/2011
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Aditi Dole, Manasi Sheth, Vidhya Naidu
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RB-Finder: An Improved Distance-Based Sliding Window Method to Detect
Recombination Breakpoints
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Monday 11/28/2011
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Ankit Soni
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Comparison of Phylogenetic Tree construction methods
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Andrei Todor
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Probabilistic Biological Network Alignment
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Friday 11/18/2011
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Yao, Jin
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Optimization of ESPRIT-Tree using bounded sequence alignment
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Wednesday 12/07/2011
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Fang Yin
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Performance Evaluation of Pairwise Sequence Alignment Algorithms
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Helia Zandi
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Finding Frequent Sub-sequences and Their Hierarchy Relation
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Friday 11/18/2011
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Robert Wilson, Phuong Vo
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Comparison of Existing Protein Secondary Structure Prediction Methods
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Monday 12/05/2011
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